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si rna against p53  (Santa Cruz Biotechnology)


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    Structured Review

    Santa Cruz Biotechnology si rna against p53
    Si Rna Against P53, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 96/100, based on 9281 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/si+rna/p53/pm41594681-62-11-17
    Average 96 stars, based on 9281 article reviews
    si rna against p53 - by Bioz Stars, 2026-10
    96/100 stars

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    Related Articles

    Targeted Gene Expression:

    Article Title: Stress hormone signalling inhibits Th1 polarization in a CD4 T‐cell‐intrinsic manner via mTORC1 and the circadian gene PER1
    Article Snippet: .. Targeted gene expression ( PER1 , PER2 , PER3 ) was knocked down as described elsewhere [ ], in up to 5 × 10 6 cells using the P3 Primary Cell 4D‐Nucleofector X Kit L (V4XP‐3024, Lonza) with 90 μl P3 primary cell solution and 100 pmol of corresponding si_RNA (resuspended in 10 ul RNAse‐free H2O): si_Non‐Specific scrambled control siRNA (si_NS or si_CTRL) (SC‐37007, Santa Cruz), si_ PER1 (SI00040537, Qiagen), si_ PER2 (SI02632189, Qiagen) and si_ PER3 (SI00117530, Qiagen). siRNA transfection was done by using the Amaxa 4D‐NucleofectorTM X System (Lonza) following the manufacturer's recommended programme for primary human T cells (with the programme code EO‐115). .. Following transfection, the naïve or memory CD4 T cells were transferred into a 12‐well plate with pre‐warmed complete IMDM and incubated at 37°C for 24 h. The next day, the cells were stimulated with 25 μl/ml of soluble antibodies (ImmunoCultTM Human CD3/CD28 T Cell Activator) (10971, StemCell) for 24 h in 1 ml in a 48‐well plate.

    Control:

    Article Title: Stress hormone signalling inhibits Th1 polarization in a CD4 T‐cell‐intrinsic manner via mTORC1 and the circadian gene PER1
    Article Snippet: .. Targeted gene expression ( PER1 , PER2 , PER3 ) was knocked down as described elsewhere [ ], in up to 5 × 10 6 cells using the P3 Primary Cell 4D‐Nucleofector X Kit L (V4XP‐3024, Lonza) with 90 μl P3 primary cell solution and 100 pmol of corresponding si_RNA (resuspended in 10 ul RNAse‐free H2O): si_Non‐Specific scrambled control siRNA (si_NS or si_CTRL) (SC‐37007, Santa Cruz), si_ PER1 (SI00040537, Qiagen), si_ PER2 (SI02632189, Qiagen) and si_ PER3 (SI00117530, Qiagen). siRNA transfection was done by using the Amaxa 4D‐NucleofectorTM X System (Lonza) following the manufacturer's recommended programme for primary human T cells (with the programme code EO‐115). .. Following transfection, the naïve or memory CD4 T cells were transferred into a 12‐well plate with pre‐warmed complete IMDM and incubated at 37°C for 24 h. The next day, the cells were stimulated with 25 μl/ml of soluble antibodies (ImmunoCultTM Human CD3/CD28 T Cell Activator) (10971, StemCell) for 24 h in 1 ml in a 48‐well plate.

    Article Title: Long non-coding RNA cancer susceptibility candidate 2 regulates the function of human fibroblast-like synoviocytes via the microRNA-18a-5p/B-cell translocation gene 3 signaling axis in rheumatoid arthritis
    Article Snippet: .. The control plasmid, lncRNA CASC2 plasmid, mimic control (cat. no. miR1N0000001-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), miR-18a-5p mimic (cat. no. miR10000072-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), inhibitor control (cat. no. miR2N0000001-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), miR-18a-5p inhibitor (cat. no. miR20000072-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), control small interfering (si)RNA, and BTG3 siRNA (Santa Cruz Biotechnology, Inc.) were transfected into HFLSs using Lipofectamine 2000 (Invitrogen; Thermo Fisher Scientific, Inc.) for 48 h referring to the manufacturer’s protocol. ..

    Article Title: MicroRNA-221 regulates cell activity and apoptosis in acute lymphoblastic leukemia via regulating PTEN
    Article Snippet: Finally, ECL reagent (EMD Millipore) was used to visualize protein bands using FluorChem FC3 (ProteinSimple), and AlphaView 3.4.0 software (ProteinSimple) was used for semi-quantification. .. Jurkat cells were seeded into 6-well plates (1x10 6 cells/well) and cultured at 37 ̊C for 24 h. Then, cells were transfected with 100 nM inhibitor control (the negative control of miR-221 inhibitor; 5'-CAGUACUUUUGUGUAGUACAA-3'; Guangzhou Ribobio Co., Ltd.), 100 nM miR-221 inhibitor (miR-221 antagonist' 5'-GAAACCCAGCAGACAAUGUAGCU-3'; Guangzhou Ribobio Co., Ltd.), 50 nM mimic control (the negative control of miR-221 mimic; 5'-CGGUACGAUCGCGGCGGGAUAUC-3'; Guangzhou Ribobio Co., Ltd.), 50 nM miR-221 mimic (miR-221 agonist; 5'-AGCUACAUUGUCUGCUGGGUUUC-3'; Guangzhou Ribobio Co., Ltd.), 100 nM miR-221 inhibitor + 0.2 μM control-small interfering (si)RNA (cat. no. sc-36869; Santa Cruz Biotechnology, Inc.) or 100 nM miR-221 inhibitor + 0.2 μM PTEN-siRNA (cat. no. sc-29459; Santa Cruz Biotechnology, Inc.) using Lipofectamine 3000 reagent, according to the manufacturer's instructions. ..

    Article Title: Identification of VIMP as a gene inhibiting cytokine production in human CD4+ effector T cells
    Article Snippet: The EBV-B cells were irradiated in RS2000 X-Ray Biological Irradiator (Rad Source Technologies) for 30 min with a total of 90 Gy. .. Targeted gene’s expression was knocked-down in up to 5 x 10 6 cells using the P3 Primary Cell 4D-Nucleofector X Kit L (V4XP-3024, Lonza) with 90 μl P3 Primary cell solution and 100 pmol of corresponding si_RNA (resuspended in 10 ul RNAse-free H2O): si_Non-Specific scrambled control siRNA (si_NS or si_CTRL) (SC-37007, Santa Cruz), si_VIMP/SELS (SI03053512, Qiagen), si_E2F5 (SI00030436, Qiagen). .. The Amaxa 4D-NucleofectorTM X System (Lonza) was used to perform the electroporation and siRNA transfection according to the manufacturer’s recommended program for primary human T cells (with the program code EO-115).

    Transfection:

    Article Title: Stress hormone signalling inhibits Th1 polarization in a CD4 T‐cell‐intrinsic manner via mTORC1 and the circadian gene PER1
    Article Snippet: .. Targeted gene expression ( PER1 , PER2 , PER3 ) was knocked down as described elsewhere [ ], in up to 5 × 10 6 cells using the P3 Primary Cell 4D‐Nucleofector X Kit L (V4XP‐3024, Lonza) with 90 μl P3 primary cell solution and 100 pmol of corresponding si_RNA (resuspended in 10 ul RNAse‐free H2O): si_Non‐Specific scrambled control siRNA (si_NS or si_CTRL) (SC‐37007, Santa Cruz), si_ PER1 (SI00040537, Qiagen), si_ PER2 (SI02632189, Qiagen) and si_ PER3 (SI00117530, Qiagen). siRNA transfection was done by using the Amaxa 4D‐NucleofectorTM X System (Lonza) following the manufacturer's recommended programme for primary human T cells (with the programme code EO‐115). .. Following transfection, the naïve or memory CD4 T cells were transferred into a 12‐well plate with pre‐warmed complete IMDM and incubated at 37°C for 24 h. The next day, the cells were stimulated with 25 μl/ml of soluble antibodies (ImmunoCultTM Human CD3/CD28 T Cell Activator) (10971, StemCell) for 24 h in 1 ml in a 48‐well plate.

    Article Title: Long non-coding RNA cancer susceptibility candidate 2 regulates the function of human fibroblast-like synoviocytes via the microRNA-18a-5p/B-cell translocation gene 3 signaling axis in rheumatoid arthritis
    Article Snippet: .. The control plasmid, lncRNA CASC2 plasmid, mimic control (cat. no. miR1N0000001-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), miR-18a-5p mimic (cat. no. miR10000072-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), inhibitor control (cat. no. miR2N0000001-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), miR-18a-5p inhibitor (cat. no. miR20000072-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), control small interfering (si)RNA, and BTG3 siRNA (Santa Cruz Biotechnology, Inc.) were transfected into HFLSs using Lipofectamine 2000 (Invitrogen; Thermo Fisher Scientific, Inc.) for 48 h referring to the manufacturer’s protocol. ..

    Article Title: MicroRNA-221 regulates cell activity and apoptosis in acute lymphoblastic leukemia via regulating PTEN
    Article Snippet: Finally, ECL reagent (EMD Millipore) was used to visualize protein bands using FluorChem FC3 (ProteinSimple), and AlphaView 3.4.0 software (ProteinSimple) was used for semi-quantification. .. Jurkat cells were seeded into 6-well plates (1x10 6 cells/well) and cultured at 37 ̊C for 24 h. Then, cells were transfected with 100 nM inhibitor control (the negative control of miR-221 inhibitor; 5'-CAGUACUUUUGUGUAGUACAA-3'; Guangzhou Ribobio Co., Ltd.), 100 nM miR-221 inhibitor (miR-221 antagonist' 5'-GAAACCCAGCAGACAAUGUAGCU-3'; Guangzhou Ribobio Co., Ltd.), 50 nM mimic control (the negative control of miR-221 mimic; 5'-CGGUACGAUCGCGGCGGGAUAUC-3'; Guangzhou Ribobio Co., Ltd.), 50 nM miR-221 mimic (miR-221 agonist; 5'-AGCUACAUUGUCUGCUGGGUUUC-3'; Guangzhou Ribobio Co., Ltd.), 100 nM miR-221 inhibitor + 0.2 μM control-small interfering (si)RNA (cat. no. sc-36869; Santa Cruz Biotechnology, Inc.) or 100 nM miR-221 inhibitor + 0.2 μM PTEN-siRNA (cat. no. sc-29459; Santa Cruz Biotechnology, Inc.) using Lipofectamine 3000 reagent, according to the manufacturer's instructions. ..

    Plasmid Preparation:

    Article Title: Long non-coding RNA cancer susceptibility candidate 2 regulates the function of human fibroblast-like synoviocytes via the microRNA-18a-5p/B-cell translocation gene 3 signaling axis in rheumatoid arthritis
    Article Snippet: .. The control plasmid, lncRNA CASC2 plasmid, mimic control (cat. no. miR1N0000001-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), miR-18a-5p mimic (cat. no. miR10000072-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), inhibitor control (cat. no. miR2N0000001-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), miR-18a-5p inhibitor (cat. no. miR20000072-1-5; Guangzhou RiboBio Co., Ltd., Guangzhou, China), control small interfering (si)RNA, and BTG3 siRNA (Santa Cruz Biotechnology, Inc.) were transfected into HFLSs using Lipofectamine 2000 (Invitrogen; Thermo Fisher Scientific, Inc.) for 48 h referring to the manufacturer’s protocol. ..

    Cell Culture:

    Article Title: MicroRNA-221 regulates cell activity and apoptosis in acute lymphoblastic leukemia via regulating PTEN
    Article Snippet: Finally, ECL reagent (EMD Millipore) was used to visualize protein bands using FluorChem FC3 (ProteinSimple), and AlphaView 3.4.0 software (ProteinSimple) was used for semi-quantification. .. Jurkat cells were seeded into 6-well plates (1x10 6 cells/well) and cultured at 37 ̊C for 24 h. Then, cells were transfected with 100 nM inhibitor control (the negative control of miR-221 inhibitor; 5'-CAGUACUUUUGUGUAGUACAA-3'; Guangzhou Ribobio Co., Ltd.), 100 nM miR-221 inhibitor (miR-221 antagonist' 5'-GAAACCCAGCAGACAAUGUAGCU-3'; Guangzhou Ribobio Co., Ltd.), 50 nM mimic control (the negative control of miR-221 mimic; 5'-CGGUACGAUCGCGGCGGGAUAUC-3'; Guangzhou Ribobio Co., Ltd.), 50 nM miR-221 mimic (miR-221 agonist; 5'-AGCUACAUUGUCUGCUGGGUUUC-3'; Guangzhou Ribobio Co., Ltd.), 100 nM miR-221 inhibitor + 0.2 μM control-small interfering (si)RNA (cat. no. sc-36869; Santa Cruz Biotechnology, Inc.) or 100 nM miR-221 inhibitor + 0.2 μM PTEN-siRNA (cat. no. sc-29459; Santa Cruz Biotechnology, Inc.) using Lipofectamine 3000 reagent, according to the manufacturer's instructions. ..

    Negative Control:

    Article Title: MicroRNA-221 regulates cell activity and apoptosis in acute lymphoblastic leukemia via regulating PTEN
    Article Snippet: Finally, ECL reagent (EMD Millipore) was used to visualize protein bands using FluorChem FC3 (ProteinSimple), and AlphaView 3.4.0 software (ProteinSimple) was used for semi-quantification. .. Jurkat cells were seeded into 6-well plates (1x10 6 cells/well) and cultured at 37 ̊C for 24 h. Then, cells were transfected with 100 nM inhibitor control (the negative control of miR-221 inhibitor; 5'-CAGUACUUUUGUGUAGUACAA-3'; Guangzhou Ribobio Co., Ltd.), 100 nM miR-221 inhibitor (miR-221 antagonist' 5'-GAAACCCAGCAGACAAUGUAGCU-3'; Guangzhou Ribobio Co., Ltd.), 50 nM mimic control (the negative control of miR-221 mimic; 5'-CGGUACGAUCGCGGCGGGAUAUC-3'; Guangzhou Ribobio Co., Ltd.), 50 nM miR-221 mimic (miR-221 agonist; 5'-AGCUACAUUGUCUGCUGGGUUUC-3'; Guangzhou Ribobio Co., Ltd.), 100 nM miR-221 inhibitor + 0.2 μM control-small interfering (si)RNA (cat. no. sc-36869; Santa Cruz Biotechnology, Inc.) or 100 nM miR-221 inhibitor + 0.2 μM PTEN-siRNA (cat. no. sc-29459; Santa Cruz Biotechnology, Inc.) using Lipofectamine 3000 reagent, according to the manufacturer's instructions. ..

    Article Title: Interferon-induced protein with tetratricopeptide repeats 3 may be a key factor in primary biliary cholangitis
    Article Snippet: Microarray data are deposited in the National Center for Biotechnology Information Gene Expression Omnibus database (accession number GSE168052). .. Validated si RNA for Ifit3 and negative control si RNA were purchased from Santa-Cruz biotech (Santa-Cruz, CA, USA) and QIAGEN, respectively. .. One day before transfection, BECs were plated in 35 mm-dishes (5 × 10 5 cells), 96-well plate (1 × 10 4 cells/well) or 12-well plate (5 × 10 4 cells/well), and then the cells were transiently transfected with either Ifit3 or control si RNA (100 nM) using Lipofectamine 3000 (Invitrogen, Carlsbad, CA), as described previously according to the manufacturer’s protocol.

    Viability Assay:

    Article Title: Diospyros lotus leaf extract and its main component myricitrin inhibit itch‑related IL‑6 and IL‑31 by suppressing microglial inflammation and microglial‑mediated astrocyte activation
    Article Snippet: .. The following reagents and materials were purchased from the specified suppliers: LPS, Griess reagent and protease inhibitors from MilliporeSigma; myricitrin from Tokyo Chemical Industry; Quanti-MAX WST-8 Cell Viability Assay Kit and WestGlow FEMTO Chemiluminescent substrate from Biomax Ltd.; radio-immunoprecipitation assay (RIPA) buffer, IL-33, inositol 1,4,5-trisphosphate receptor 1 (IP3R1), lipocalin-2 (LCN2), glial fibrillary acidic protein (GFAP), goat anti-rabbit IgG Alexa Fluor 488 antibodies and goat anti-mouse IgG Alexa Fluor 488 from Thermo Fisher Scientific, Inc.; IL-31 antibodies from Abcam; β-actin, phosphorylated (p-)IκBα, IκBα, p-NF-κB, NF-κB, p-JNK, JNK, p-p38, p38, oncostatin M receptor (OSMR), Toll-like receptor 4 (TLR4), IL-6, interleukin 31 receptor a (IL31RA) antibodies and IL-31 short interfering (si)RNA from Santa Cruz Biotechnology, Inc.; and ProLong Gold Antifade Reagent with DAPI, p-Ikk, Ikk, p-JAK1, JAK1 p-STAT3, STAT3, p-ERK and ERK antibodies from Cell Signaling Technology, Inc. .. Mouse-origin microglia (CRL-3265) and astrocytes (CRL-2541) were obtained from ATCC.

    Radio Immunoprecipitation:

    Article Title: Diospyros lotus leaf extract and its main component myricitrin inhibit itch‑related IL‑6 and IL‑31 by suppressing microglial inflammation and microglial‑mediated astrocyte activation
    Article Snippet: .. The following reagents and materials were purchased from the specified suppliers: LPS, Griess reagent and protease inhibitors from MilliporeSigma; myricitrin from Tokyo Chemical Industry; Quanti-MAX WST-8 Cell Viability Assay Kit and WestGlow FEMTO Chemiluminescent substrate from Biomax Ltd.; radio-immunoprecipitation assay (RIPA) buffer, IL-33, inositol 1,4,5-trisphosphate receptor 1 (IP3R1), lipocalin-2 (LCN2), glial fibrillary acidic protein (GFAP), goat anti-rabbit IgG Alexa Fluor 488 antibodies and goat anti-mouse IgG Alexa Fluor 488 from Thermo Fisher Scientific, Inc.; IL-31 antibodies from Abcam; β-actin, phosphorylated (p-)IκBα, IκBα, p-NF-κB, NF-κB, p-JNK, JNK, p-p38, p38, oncostatin M receptor (OSMR), Toll-like receptor 4 (TLR4), IL-6, interleukin 31 receptor a (IL31RA) antibodies and IL-31 short interfering (si)RNA from Santa Cruz Biotechnology, Inc.; and ProLong Gold Antifade Reagent with DAPI, p-Ikk, Ikk, p-JAK1, JAK1 p-STAT3, STAT3, p-ERK and ERK antibodies from Cell Signaling Technology, Inc. .. Mouse-origin microglia (CRL-3265) and astrocytes (CRL-2541) were obtained from ATCC.

    Expressing:

    Article Title: Identification of VIMP as a gene inhibiting cytokine production in human CD4+ effector T cells
    Article Snippet: The EBV-B cells were irradiated in RS2000 X-Ray Biological Irradiator (Rad Source Technologies) for 30 min with a total of 90 Gy. .. Targeted gene’s expression was knocked-down in up to 5 x 10 6 cells using the P3 Primary Cell 4D-Nucleofector X Kit L (V4XP-3024, Lonza) with 90 μl P3 Primary cell solution and 100 pmol of corresponding si_RNA (resuspended in 10 ul RNAse-free H2O): si_Non-Specific scrambled control siRNA (si_NS or si_CTRL) (SC-37007, Santa Cruz), si_VIMP/SELS (SI03053512, Qiagen), si_E2F5 (SI00030436, Qiagen). .. The Amaxa 4D-NucleofectorTM X System (Lonza) was used to perform the electroporation and siRNA transfection according to the manufacturer’s recommended program for primary human T cells (with the program code EO-115).



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    Results of functional validation experiments on target genes AGPAT3 and ECHDC3 in adipocytes (A) qPCR results of expression levels of 16 lipid metabolism-related genes. mRNA expression of the target genes was significantly knocked down by approximately 90% in all three <t>transfection</t> groups. The expression of FABP4 , FASN , ADIPOR1 , and CEBPα was significantly elevated in the si- AGPAT3 group, especially FABP4 and ADIPOR1 (∗ p < 0.05 by Student’s t test). (B) Comparison results of the triglyceride content between the two target gene knockdown groups and the control group. Triglyceride quantification revealed that triglyceride levels were significantly higher in all three knockdown groups than in the control group (∗ p < 0.05 by Dunnett’s test). (C–F) Comparison results of four fatty acids content (C18:0, C18:2, C22:0, and C22:6) between the two target gene knockdown groups and the control group. Fatty acid profiling showed that both AGPAT3 and ECHDC3 knockdown significantly suppressed the accumulation of most fatty acids, including C18:0, C18:2, and C22:6 (∗ p < 0.05 by Dunnett’s test). Four groups were included: si-NC (negative control, white), si- AGPAT3 (red), si- ECHDC3 (green), and si-A3+si-E3 (double knockdown, blue) ( n = 3 technical replicates from 4 biological replicates for each transfection group). Data are represented as the mean ± SEM.
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    Results of functional validation experiments on target genes AGPAT3 and ECHDC3 in adipocytes (A) qPCR results of expression levels of 16 lipid metabolism-related genes. mRNA expression of the target genes was significantly knocked down by approximately 90% in all three <t>transfection</t> groups. The expression of FABP4 , FASN , ADIPOR1 , and CEBPα was significantly elevated in the si- AGPAT3 group, especially FABP4 and ADIPOR1 (∗ p < 0.05 by Student’s t test). (B) Comparison results of the triglyceride content between the two target gene knockdown groups and the control group. Triglyceride quantification revealed that triglyceride levels were significantly higher in all three knockdown groups than in the control group (∗ p < 0.05 by Dunnett’s test). (C–F) Comparison results of four fatty acids content (C18:0, C18:2, C22:0, and C22:6) between the two target gene knockdown groups and the control group. Fatty acid profiling showed that both AGPAT3 and ECHDC3 knockdown significantly suppressed the accumulation of most fatty acids, including C18:0, C18:2, and C22:6 (∗ p < 0.05 by Dunnett’s test). Four groups were included: si-NC (negative control, white), si- AGPAT3 (red), si- ECHDC3 (green), and si-A3+si-E3 (double knockdown, blue) ( n = 3 technical replicates from 4 biological replicates for each transfection group). Data are represented as the mean ± SEM.
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    Results of functional validation experiments on target genes AGPAT3 and ECHDC3 in adipocytes (A) qPCR results of expression levels of 16 lipid metabolism-related genes. mRNA expression of the target genes was significantly knocked down by approximately 90% in all three <t>transfection</t> groups. The expression of FABP4 , FASN , ADIPOR1 , and CEBPα was significantly elevated in the si- AGPAT3 group, especially FABP4 and ADIPOR1 (∗ p < 0.05 by Student’s t test). (B) Comparison results of the triglyceride content between the two target gene knockdown groups and the control group. Triglyceride quantification revealed that triglyceride levels were significantly higher in all three knockdown groups than in the control group (∗ p < 0.05 by Dunnett’s test). (C–F) Comparison results of four fatty acids content (C18:0, C18:2, C22:0, and C22:6) between the two target gene knockdown groups and the control group. Fatty acid profiling showed that both AGPAT3 and ECHDC3 knockdown significantly suppressed the accumulation of most fatty acids, including C18:0, C18:2, and C22:6 (∗ p < 0.05 by Dunnett’s test). Four groups were included: si-NC (negative control, white), si- AGPAT3 (red), si- ECHDC3 (green), and si-A3+si-E3 (double knockdown, blue) ( n = 3 technical replicates from 4 biological replicates for each transfection group). Data are represented as the mean ± SEM.
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    Results of functional validation experiments on target genes AGPAT3 and ECHDC3 in adipocytes (A) qPCR results of expression levels of 16 lipid metabolism-related genes. mRNA expression of the target genes was significantly knocked down by approximately 90% in all three <t>transfection</t> groups. The expression of FABP4 , FASN , ADIPOR1 , and CEBPα was significantly elevated in the si- AGPAT3 group, especially FABP4 and ADIPOR1 (∗ p < 0.05 by Student’s t test). (B) Comparison results of the triglyceride content between the two target gene knockdown groups and the control group. Triglyceride quantification revealed that triglyceride levels were significantly higher in all three knockdown groups than in the control group (∗ p < 0.05 by Dunnett’s test). (C–F) Comparison results of four fatty acids content (C18:0, C18:2, C22:0, and C22:6) between the two target gene knockdown groups and the control group. Fatty acid profiling showed that both AGPAT3 and ECHDC3 knockdown significantly suppressed the accumulation of most fatty acids, including C18:0, C18:2, and C22:6 (∗ p < 0.05 by Dunnett’s test). Four groups were included: si-NC (negative control, white), si- AGPAT3 (red), si- ECHDC3 (green), and si-A3+si-E3 (double knockdown, blue) ( n = 3 technical replicates from 4 biological replicates for each transfection group). Data are represented as the mean ± SEM.
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    Results of functional validation experiments on target genes AGPAT3 and ECHDC3 in adipocytes (A) qPCR results of expression levels of 16 lipid metabolism-related genes. mRNA expression of the target genes was significantly knocked down by approximately 90% in all three transfection groups. The expression of FABP4 , FASN , ADIPOR1 , and CEBPα was significantly elevated in the si- AGPAT3 group, especially FABP4 and ADIPOR1 (∗ p < 0.05 by Student’s t test). (B) Comparison results of the triglyceride content between the two target gene knockdown groups and the control group. Triglyceride quantification revealed that triglyceride levels were significantly higher in all three knockdown groups than in the control group (∗ p < 0.05 by Dunnett’s test). (C–F) Comparison results of four fatty acids content (C18:0, C18:2, C22:0, and C22:6) between the two target gene knockdown groups and the control group. Fatty acid profiling showed that both AGPAT3 and ECHDC3 knockdown significantly suppressed the accumulation of most fatty acids, including C18:0, C18:2, and C22:6 (∗ p < 0.05 by Dunnett’s test). Four groups were included: si-NC (negative control, white), si- AGPAT3 (red), si- ECHDC3 (green), and si-A3+si-E3 (double knockdown, blue) ( n = 3 technical replicates from 4 biological replicates for each transfection group). Data are represented as the mean ± SEM.

    Journal: iScience

    Article Title: Integration of GWAS and eQTL analysis reveals regulatory CNVs for fatty acid traits in cattle

    doi: 10.1016/j.isci.2026.116180

    Figure Lengend Snippet: Results of functional validation experiments on target genes AGPAT3 and ECHDC3 in adipocytes (A) qPCR results of expression levels of 16 lipid metabolism-related genes. mRNA expression of the target genes was significantly knocked down by approximately 90% in all three transfection groups. The expression of FABP4 , FASN , ADIPOR1 , and CEBPα was significantly elevated in the si- AGPAT3 group, especially FABP4 and ADIPOR1 (∗ p < 0.05 by Student’s t test). (B) Comparison results of the triglyceride content between the two target gene knockdown groups and the control group. Triglyceride quantification revealed that triglyceride levels were significantly higher in all three knockdown groups than in the control group (∗ p < 0.05 by Dunnett’s test). (C–F) Comparison results of four fatty acids content (C18:0, C18:2, C22:0, and C22:6) between the two target gene knockdown groups and the control group. Fatty acid profiling showed that both AGPAT3 and ECHDC3 knockdown significantly suppressed the accumulation of most fatty acids, including C18:0, C18:2, and C22:6 (∗ p < 0.05 by Dunnett’s test). Four groups were included: si-NC (negative control, white), si- AGPAT3 (red), si- ECHDC3 (green), and si-A3+si-E3 (double knockdown, blue) ( n = 3 technical replicates from 4 biological replicates for each transfection group). Data are represented as the mean ± SEM.

    Article Snippet: The si-RNA transfection reagents were purchased from Sangon Biotech (Shanghai) Co., Ltd.

    Techniques: Functional Assay, Biomarker Discovery, Expressing, Transfection, Comparison, Knockdown, Control, Negative Control